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Major Resources

Photo of Daphnia. Photo credit: Joachim.mergeay@bio.kuleuven.be University of Leuven, Belgium
spacerCommunity Resources
bullet Community resources are shared via the Daphnia Genomics Consortium (DGC) (http://daphnia.cgb.indiana.edu/) website and the DGC collaboration Wiki (https://dgc.cgb.indiana.edu/display/DGC/Home )
spacerGenomic Resources
bullet Daphnia genome data can be explored and downloaded from
spacerBAC & Fosmid Libraries
bullet Clones from large insert genomic DNA libraries are archived at the Hubbard Center for Genome Studies, University of New Hampshire
bullet Contact W. Kelley Thomas, PhD
spacercDNA Libraries
bullet Thirty seven cDNA libraries created from animals challenged by diverse ecological conditions and containing over 200,000 arrayed cDNA clones are archived at The Center for Genomics and Bioinformatics, Indiana University (https://dgc.cgb.indiana.edu/display/DGC/cDNA+Libraries)
bullet Contact John Colbourne, PhD
bullet Three types of microarrays are in production or available at the Center for Genomics and Bioinformatics, Indiana University
  • Whole-Genome Tiling Arrays (Daphnia pulex)
  • High-density 12-plex Expression arrays (Daphnia pulex)
  • High-density 12-plex Genotyping arrays (Daphnia magna)
bullet Contact John Colbourne, PhD
spacerBioinformatic Data
bullet Gene Ontologies, KEGG, KOG annotations
bullet Unigene Clusters
bullet EST Resources
bullet Genetic Maps
bullet Contact Don Gilbert, PhD
spacerQTL Resources
bullet Recombinant Mapped Lines
bullet Contact Michael Pfrender, PhD
bullet QTL Database
spacerOther Resources
bullet Protocols for Daphnia including culture and genomic studies
bullet Daphnia Stock Collection
bullet Contact Jeff Dudycha, PhD